GSTM4
glutathione S-transferase mu 4

Cytosolic and membrane-bound forms of glutathione S-transferase are encoded by two distinct supergene families. At present, eight distinct classes of the soluble cytoplasmic mammalian glutathione S-transferases have been identified: alpha, kappa, mu, omega, pi, sigma, theta and zeta. This gene encodes a glutathione S-transferase that belongs to the mu class. The mu class of enzymes functions in the detoxification of electrophilic compounds, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress, by conjugation with glutathione. The genes encoding the mu class of enzymes are organized in a gene cluster on chromosome 1p13.3 and are known to be highly polymorphic. These genetic variations can change an individual's susceptibility to carcinogens and toxins as well as affect the toxicity and efficacy of certain drugs. Diversification of these genes has occurred in regions encoding substrate-binding domains, as well as in tissue expression patterns, to accommodate an increasing number of foreign compounds. Multiple transcript variants, each encoding a distinct protein isoform, have been identified. [provided by RefSeq, Jul 2008]

Biological processes 19 terms
Expression (TPM)
GSTM4 — as a Regulated Gene

TFs regulating GSTM4 0 TFs

Transcription factors with Perturb-seq knockdown data for GSTM4. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = GSTM4 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to GSTM4

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of GSTM4, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr1:109,397,369–109,398,671 258.1 kb Distal (>10kb) Multiome 654
chr1:109,425,842–109,427,054 229.6 kb Distal (>10kb) Multiome 922
chr1:109,466,294–109,467,385 189.5 kb Distal (>10kb) Multiome 452
chr1:109,483,147–109,484,806 172.2 kb Distal (>10kb) Multiome 1031
chr1:109,493,695–109,494,597 162.0 kb Distal (>10kb) Multiome 842
chr1:109,498,180–109,498,608 157.7 kb Distal (>10kb) Multiome 178
chr1:109,509,196–109,510,011 146.5 kb Distal (>10kb) Multiome 448
chr1:109,532,157–109,533,159 123.4 kb Distal (>10kb) Multiome 517
chr1:109,548,385–109,549,096 107.5 kb Distal (>10kb) Multiome 855
chr1:109,619,434–109,621,357 35.1 kb Distal (>10kb) Multiome 814
chr1:109,643,342–109,643,856 12.6 kb Distal (>10kb) Multiome 470
chr1:109,655,698–109,656,566 33 bp At TSS Multiome 707
chr1:109,667,812–109,668,362 11.9 kb Distal (>10kb) Multiome 287
chr1:109,739,695–109,740,873 84.1 kb Distal (>10kb) Multiome 633
chr1:109,877,325–109,877,790 221.4 kb Distal (>10kb) Multiome 378
chr1:109,910,465–109,911,472 254.7 kb Distal (>10kb) Multiome 618
chr1:109,931,127–109,931,638 275.2 kb Distal (>10kb) Multiome 379
chr1:109,984,134–109,985,352 328.6 kb Distal (>10kb) Multiome HiCAR 946

Genome Browser

Genomic view of the GSTM4 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr1:109,387,369 – 109,995,352
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq