GALR2
galanin receptor 2 | GALNR2

Galanin is an important neuromodulator present in the brain, gastrointestinal system, and hypothalamopituitary axis. It is a 30-amino acid non-C-terminally amidated peptide that potently stimulates growth hormone secretion, inhibits cardiac vagal slowing of heart rate, abolishes sinus arrhythmia, and inhibits postprandial gastrointestinal motility. The actions of galanin are mediated through interaction with specific membrane receptors that are members of the 7-transmembrane family of G protein-coupled receptors. GALR2 interacts with the N-terminal residues of the galanin peptide. The primary signaling mechanism for GALR2 is through the phospholipase C/protein kinase C pathway (via Gq), in contrast to GALR1, which communicates its intracellular signal by inhibition of adenylyl cyclase through Gi. However, it has been demonstrated that GALR2 couples efficiently to both the Gq and Gi proteins to simultaneously activate 2 independent signal transduction pathways. [provided by RefSeq, Jul 2008]

Developmental clusters: GC7
Biological processes 30 terms
Expression (TPM)
GALR2 — as a Regulated Gene

TFs regulating GALR2 0 TFs

Transcription factors with Perturb-seq knockdown data for GALR2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = GALR2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to GALR2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of GALR2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr17:75,778,786–75,780,191 294.9 kb Distal (>10kb) Multiome 1118
chr17:75,784,060–75,785,640 289.9 kb Distal (>10kb) Multiome 1176
chr17:75,827,420–75,828,293 247.0 kb Distal (>10kb) Multiome 404
chr17:75,830,158–75,830,695 244.4 kb Distal (>10kb) Multiome 190
chr17:75,832,912–75,833,396 241.6 kb Distal (>10kb) Multiome 104
chr17:75,845,103–75,845,662 229.4 kb Distal (>10kb) Multiome 703
chr17:75,854,955–75,856,363 219.3 kb Distal (>10kb) Multiome 1038
chr17:75,877,486–75,878,900 196.7 kb Distal (>10kb) Multiome 884
chr17:75,896,392–75,897,754 177.8 kb Distal (>10kb) Multiome 831
chr17:75,904,371–75,905,532 169.7 kb Distal (>10kb) Multiome 1045
chr17:75,940,734–75,941,471 133.7 kb Distal (>10kb) Multiome 982
chr17:75,978,646–75,980,102 95.4 kb Distal (>10kb) Multiome 1090
chr17:75,983,292–75,984,226 91.0 kb Distal (>10kb) Multiome 236
chr17:76,014,120–76,014,727 60.4 kb Distal (>10kb) Multiome 489
chr17:76,029,331–76,030,158 45.1 kb Distal (>10kb) Multiome 722
chr17:76,067,009–76,067,331 7.4 kb Proximal (<10kb) 11
chr17:76,072,173–76,072,853 2.2 kb Proximal (<10kb) Multiome 893
chr17:76,074,414–76,075,796 130 bp At TSS Multiome 280
chr17:76,103,272–76,104,343 29.0 kb Distal (>10kb) Multiome 798
chr17:76,121,142–76,122,265 46.8 kb Distal (>10kb) Multiome 689
chr17:76,132,004–76,133,216 57.9 kb Distal (>10kb) Multiome 536
chr17:76,135,151–76,135,652 60.5 kb Distal (>10kb) Multiome 104
chr17:76,141,012–76,141,958 66.6 kb Distal (>10kb) Multiome 616
chr17:76,240,278–76,241,169 165.9 kb Distal (>10kb) Multiome 560
chr17:76,264,834–76,266,286 190.4 kb Distal (>10kb) Multiome 868
chr17:76,353,245–76,354,535 279.2 kb Distal (>10kb) Multiome 1071

Genome Browser

Genomic view of the GALR2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr17:75,768,786 – 76,364,535
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq