FAM83E
scaffolding CK1 anchoring protein E | FLJ20200, FAM83E

Enables protein kinase binding activity. Predicted to be involved in signal transduction. [provided by Alliance of Genome Resources, Jul 2025]

Biological processes 6 terms
Expression (TPM)
FAM83E — as a Regulated Gene

TFs regulating FAM83E 0 TFs

Transcription factors with Perturb-seq knockdown data for FAM83E. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = FAM83E upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to FAM83E

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of FAM83E, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:48,320,062–48,322,328 293.3 kb Distal (>10kb) Multiome 826
chr19:48,330,094–48,330,787 284.5 kb Distal (>10kb) Multiome 460
chr19:48,332,701–48,333,506 281.9 kb Distal (>10kb) Multiome 615
chr19:48,333,584–48,334,372 280.7 kb Distal (>10kb) Multiome 554
chr19:48,363,062–48,364,710 250.5 kb Distal (>10kb) Multiome 940
chr19:48,390,663–48,391,935 223.2 kb Distal (>10kb) Multiome 816
chr19:48,397,916–48,399,301 216.0 kb Distal (>10kb) Multiome 619
chr19:48,399,411–48,400,900 214.3 kb Distal (>10kb) Multiome 548
chr19:48,414,121–48,416,085 199.3 kb Distal (>10kb) Multiome 298
chr19:48,445,379–48,446,456 168.9 kb Distal (>10kb) Multiome 845
chr19:48,468,758–48,470,027 145.7 kb Distal (>10kb) Multiome 860
chr19:48,490,661–48,494,449 121.6 kb Distal (>10kb) Multiome 633
chr19:48,500,898–48,503,050 112.8 kb Distal (>10kb) Multiome 656
chr19:48,510,624–48,511,212 104.1 kb Distal (>10kb) Multiome 268
chr19:48,513,480–48,514,294 100.9 kb Distal (>10kb) Multiome 585
chr19:48,614,318–48,615,255 70 bp At TSS Multiome 524
chr19:48,618,726–48,619,869 4.5 kb Proximal (<10kb) Multiome 1012
chr19:48,623,839–48,624,688 9.4 kb Proximal (<10kb) Multiome 529
chr19:48,629,369–48,631,306 15.2 kb Distal (>10kb) Multiome 402
chr19:48,634,242–48,636,244 19.8 kb Distal (>10kb) Multiome 868
chr19:48,636,802–48,639,603 22.9 kb Distal (>10kb) Multiome 956
chr19:48,645,454–48,647,163 31.7 kb Distal (>10kb) Multiome 750
chr19:48,675,421–48,675,873 60.7 kb Distal (>10kb) Multiome 415
chr19:48,695,830–48,697,033 81.3 kb Distal (>10kb) Multiome 253
chr19:48,713,646–48,714,846 99.5 kb Distal (>10kb) Multiome 719
chr19:48,716,551–48,717,038 102.1 kb Distal (>10kb) Multiome 241
chr19:48,720,420–48,721,301 106.1 kb Distal (>10kb) Multiome 689
chr19:48,735,001–48,735,602 120.4 kb Distal (>10kb) Multiome 161
chr19:48,738,441–48,739,812 124.1 kb Distal (>10kb) Multiome 743
chr19:48,741,194–48,741,939 126.8 kb Distal (>10kb) Multiome 350
chr19:48,746,830–48,747,395 132.3 kb Distal (>10kb) Multiome 402
chr19:48,752,314–48,753,547 138.1 kb Distal (>10kb) Multiome 545
chr19:48,795,165–48,795,736 180.7 kb Distal (>10kb) Multiome 724
chr19:48,806,734–48,807,478 192.1 kb Distal (>10kb) Multiome 452
chr19:48,810,774–48,811,494 196.2 kb Distal (>10kb) Multiome 662
chr19:48,812,048–48,813,099 197.7 kb Distal (>10kb) Multiome 603
chr19:48,835,571–48,838,073 222.4 kb Distal (>10kb) Multiome 621
chr19:48,872,000–48,873,835 257.6 kb Distal (>10kb) Multiome 987
chr19:48,895,958–48,896,628 281.5 kb Distal (>10kb) Multiome 207
chr19:48,899,782–48,900,620 285.4 kb Distal (>10kb) Multiome 710

Genome Browser

Genomic view of the FAM83E locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:48,310,062 – 48,910,620
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq