FAHD2A
fumarylacetoacetate hydrolase domain containing 2A | CGI-105

Enables oxaloacetate tautomerase activity. Involved in oxaloacetate metabolic process. Located in mitochondrion. [provided by Alliance of Genome Resources, Jul 2025]

Biological processes 8 terms
Expression (TPM)
FAHD2A — as a Regulated Gene

TFs regulating FAHD2A 0 TFs

Transcription factors with Perturb-seq knockdown data for FAHD2A. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = FAHD2A upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to FAHD2A

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of FAHD2A, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr2:95,121,334–95,122,514 280.8 kb Distal (>10kb) Multiome 934
chr2:95,158,615–95,160,452 243.0 kb Distal (>10kb) Multiome 539
chr2:95,165,117–95,166,301 237.0 kb Distal (>10kb) Multiome 931
chr2:95,206,705–95,208,058 195.3 kb Distal (>10kb) Multiome 713
chr2:95,345,216–95,347,558 57.0 kb Distal (>10kb) Multiome 572
chr2:95,388,847–95,389,649 13.4 kb Distal (>10kb) Multiome 269
chr2:95,392,830–95,392,999 9.7 kb Proximal (<10kb) 24
chr2:95,401,933–95,403,542 89 bp At TSS Multiome 885
chr2:95,682,442–95,683,289 280.0 kb Distal (>10kb) Multiome 126
chr2:95,713,301–95,714,629 311.2 kb Distal (>10kb) Multiome HiCAR 154

Genome Browser

Genomic view of the FAHD2A locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr2:95,111,334 – 95,724,629
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq