Transcription factors with Perturb-seq knockdown data for ENSG00000290792. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000290792 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000290792, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr1:149,636,175–149,637,106 | 214.3 kb | Distal (>10kb) Multiome | 687 | |
| chr1:149,812,136–149,812,633 | 38.5 kb | Distal (>10kb) Multiome | 190 | |
| chr1:149,885,029–149,889,131 | 37.3 kb | Distal (>10kb) Multiome | 1126 | |
| chr1:149,899,425–149,900,227 | 48.7 kb | Distal (>10kb) Multiome | 650 | |
| chr1:149,927,507–149,928,019 | 77.0 kb | Distal (>10kb) Multiome | 744 | |
| chr1:150,010,143–150,011,088 | 159.7 kb | Distal (>10kb) Multiome | 961 | |
| chr1:150,066,903–150,067,886 | 216.7 kb | Distal (>10kb) Multiome | 986 | |
| chr1:150,149,493–150,150,439 | 299.1 kb | Distal (>10kb) Multiome | 448 |
Genomic view of the ENSG00000290792 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.