Transcription factors with Perturb-seq knockdown data for ENSG00000290450. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000290450 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000290450, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr17:30,340,166–30,340,693 | 291.3 kb | Distal (>10kb) Multiome | 394 | |
| chr17:30,378,665–30,379,625 | 252.9 kb | Distal (>10kb) Multiome | 693 | |
| chr17:30,477,182–30,477,726 | 154.4 kb | Distal (>10kb) Multiome | 903 | |
| chr17:30,599,655–30,601,277 | 31.3 kb | Distal (>10kb) Multiome | 793 | |
| chr17:30,707,918–30,709,425 | 76.9 kb | Distal (>10kb) Multiome | 471 | |
| chr17:30,731,337–30,732,077 | 99.9 kb | Distal (>10kb) Multiome | 352 | |
| chr17:30,824,074–30,825,310 | 193.0 kb | Distal (>10kb) Multiome | 868 | |
| chr17:30,831,761–30,832,403 | 200.3 kb | Distal (>10kb) Multiome | 803 | |
| chr17:30,906,142–30,906,858 | 274.6 kb | Distal (>10kb) Multiome | 1033 | |
| chr17:30,921,825–30,922,307 | 290.3 kb | Distal (>10kb) Multiome | 262 |
Genomic view of the ENSG00000290450 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.