Transcription factors with Perturb-seq knockdown data for ENSG00000289926. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000289926 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000289926, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr17:61,389,816–61,390,219 | 7.3 kb | Proximal (<10kb) | 440 | |
| chr17:61,393,625–61,393,850 | 3.6 kb | Proximal (<10kb) | 248 | |
| chr17:61,394,029–61,394,488 | 3.0 kb | Proximal (<10kb) | 497 | |
| chr17:61,395,593–61,397,794 | at TSS | At TSS | 334 | |
| chr17:61,398,963–61,400,696 | 1.5 kb | Proximal (<10kb) | 714 | |
| chr17:61,404,425–61,405,894 | 6.9 kb | Proximal (<10kb) | 178 |
Genomic view of the ENSG00000289926 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.