Transcription factors with Perturb-seq knockdown data for ENSG00000262413. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000262413 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000262413, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr17:81,859,762–81,861,595 | 6.1 kb | Proximal (<10kb) | 1134 | |
| chr17:81,867,228–81,867,711 | 9 bp | At TSS | 680 | |
| chr17:81,867,733–81,868,293 | 12 bp | At TSS | 676 | |
| chr17:81,868,421–81,868,978 | 700 bp | At TSS | 577 | |
| chr17:81,869,000–81,872,289 | 1.3 kb | Proximal (<10kb) | 1136 |
Genomic view of the ENSG00000262413 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.