DNLZ
DNL-type zinc finger | HEP, RP11-413M3.2, TIMM15, ZIM17, bA413M3.2, C9orf151
DNLZ — as a Regulated Gene

TFs regulating DNLZ 0 TFs

Transcription factors with Perturb-seq knockdown data for DNLZ. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DNLZ upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DNLZ

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DNLZ, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr9:136,094,901–136,095,992 268.3 kb Distal (>10kb) Multiome 445
chr9:136,109,321–136,110,010 254.1 kb Distal (>10kb) Multiome 643
chr9:136,117,952–136,119,826 244.9 kb Distal (>10kb) Multiome 931
chr9:136,132,442–136,133,645 230.5 kb Distal (>10kb) Multiome 343
chr9:136,245,219–136,246,310 117.9 kb Distal (>10kb) Multiome 608
chr9:136,267,002–136,267,928 96.4 kb Distal (>10kb) Multiome 459
chr9:136,327,140–136,327,919 36.2 kb Distal (>10kb) Multiome 310
chr9:136,342,464–136,343,245 20.8 kb Distal (>10kb) Multiome 326
chr9:136,362,899–136,364,677 382 bp At TSS Multiome 969
chr9:136,399,639–136,400,642 36.5 kb Distal (>10kb) Multiome 776
chr9:136,410,307–136,410,943 46.9 kb Distal (>10kb) Multiome 740
chr9:136,438,826–136,440,227 76.1 kb Distal (>10kb) Multiome 608
chr9:136,482,405–136,485,297 119.6 kb Distal (>10kb) Multiome 938
chr9:136,545,392–136,547,129 182.4 kb Distal (>10kb) Multiome 710
chr9:136,572,053–136,572,865 208.6 kb Distal (>10kb) Multiome 239
chr9:136,587,135–136,588,835 224.6 kb Distal (>10kb) Multiome 453
chr9:136,626,479–136,627,366 263.2 kb Distal (>10kb) Multiome 451
chr9:136,665,223–136,666,507 302.1 kb Distal (>10kb) Multiome HiCAR 409

Genome Browser

Genomic view of the DNLZ locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr9:136,084,901 – 136,676,507
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq