DESI1
desumoylating isopeptidase 1 | D15Wsu75e, DESI-1, POST, FAM152B, PPPDE2
DESI1 — as a Regulated Gene

TFs regulating DESI1 0 TFs

Transcription factors with Perturb-seq knockdown data for DESI1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DESI1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DESI1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DESI1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr22:41,380,458–41,382,737 239.3 kb Distal (>10kb) Multiome 925
chr22:41,413,486–41,414,305 207.2 kb Distal (>10kb) Multiome 832
chr22:41,444,084–41,445,743 176.5 kb Distal (>10kb) Multiome 607
chr22:41,446,165–41,449,007 174.1 kb Distal (>10kb) Multiome 1188
chr22:41,468,341–41,469,602 152.1 kb Distal (>10kb) Multiome 920
chr22:41,512,659–41,513,151 108.0 kb Distal (>10kb) Multiome 354
chr22:41,543,855–41,544,782 76.5 kb Distal (>10kb) Multiome 755
chr22:41,589,188–41,590,530 31.1 kb Distal (>10kb) Multiome 758
chr22:41,620,173–41,622,049 91 bp At TSS Multiome 880
chr22:41,666,496–41,667,405 45.8 kb Distal (>10kb) Multiome 725
chr22:41,697,169–41,697,792 76.3 kb Distal (>10kb) Multiome 464
chr22:41,800,274–41,801,345 179.6 kb Distal (>10kb) Multiome 816
chr22:41,832,291–41,834,215 211.9 kb Distal (>10kb) Multiome 1023
chr22:41,845,927–41,846,489 225.1 kb Distal (>10kb) Multiome 271
chr22:41,909,821–41,910,788 289.2 kb Distal (>10kb) Multiome 251
chr22:41,913,915–41,914,497 293.1 kb Distal (>10kb) Multiome 143
chr22:41,914,624–41,915,454 294.0 kb Distal (>10kb) Multiome 273
chr22:41,919,501–41,920,436 298.9 kb Distal (>10kb) Multiome 337

Genome Browser

Genomic view of the DESI1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr22:41,370,458 – 41,930,436
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq