DECR2
2,4-dienoyl-CoA reductase 2 | PDCR, SDR17C1
DECR2 — as a Regulated Gene

TFs regulating DECR2 0 TFs

Transcription factors with Perturb-seq knockdown data for DECR2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DECR2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DECR2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DECR2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr16:138,551–139,186 263.2 kb Distal (>10kb) Multiome 674
chr16:164,983–166,147 236.8 kb Distal (>10kb) Multiome 234
chr16:180,313–181,713 220.4 kb Distal (>10kb) Multiome 994
chr16:228,869–229,598 172.6 kb Distal (>10kb) Multiome 1035
chr16:234,152–235,669 167.1 kb Distal (>10kb) Multiome 908
chr16:351,804–354,436 49.0 kb Distal (>10kb) Multiome 654
chr16:378,999–379,813 22.5 kb Distal (>10kb) Multiome 225
chr16:380,836–382,614 19.9 kb Distal (>10kb) Multiome 634
chr16:383,438–384,218 18.1 kb Distal (>10kb) Multiome 342
chr16:396,893–397,640 4.4 kb Proximal (<10kb) Multiome 496
chr16:397,727–398,272 3.6 kb Proximal (<10kb) 342
chr16:400,630–401,252 639 bp At TSS 292
chr16:401,380–402,199 37 bp At TSS Multiome 818
chr16:424,888–426,136 23.7 kb Distal (>10kb) Multiome 752
chr16:483,333–484,000 81.9 kb Distal (>10kb) Multiome HiCAR 143
chr16:526,749–528,601 125.7 kb Distal (>10kb) Multiome HiCAR 811
chr16:569,530–570,338 168.0 kb Distal (>10kb) Multiome 492
chr16:578,896–579,353 177.3 kb Distal (>10kb) Multiome 511
chr16:588,593–590,724 188.0 kb Distal (>10kb) Multiome 853
chr16:635,900–638,127 234.5 kb Distal (>10kb) Multiome 1021
chr16:641,491–643,007 240.0 kb Distal (>10kb) Multiome 856
chr16:648,795–649,829 247.4 kb Distal (>10kb) Multiome 862
chr16:660,457–661,656 259.1 kb Distal (>10kb) Multiome 456
chr16:667,633–668,442 266.1 kb Distal (>10kb) Multiome 838
chr16:678,847–681,585 278.1 kb Distal (>10kb) Multiome 803
chr16:683,618–684,859 282.5 kb Distal (>10kb) Multiome 701
chr16:694,897–695,485 293.5 kb Distal (>10kb) Multiome 390

Genome Browser

Genomic view of the DECR2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr16:128,551 – 705,485
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq