The protein encoded by this gene contains an ankyrin repeat sequence and SOCS box domain. The SOCS box serves to couple suppressor of cytokine signalling (SOCS) proteins and their binding partners with the elongin B and C complex, targeting them for ubiquitination and degradation. [provided by RefSeq, Aug 2016]
Transcription factors with Perturb-seq knockdown data for ASB1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ASB1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ASB1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr2:238,158,343–238,159,417 | 268.1 kb | Distal (>10kb) Multiome | 343 | |
| chr2:238,203,020–238,204,239 | 223.3 kb | Distal (>10kb) Multiome | 702 | |
| chr2:238,234,336–238,234,816 | 192.5 kb | Distal (>10kb) Multiome | 543 | |
| chr2:238,238,732–238,241,847 | 186.9 kb | Distal (>10kb) Multiome | 1072 | |
| chr2:238,287,738–238,289,462 | 138.1 kb | Distal (>10kb) Multiome | 893 | |
| chr2:238,289,660–238,290,518 | 136.6 kb | Distal (>10kb) Multiome | 315 | |
| chr2:238,319,822–238,321,188 | 106.6 kb | Distal (>10kb) Multiome | 623 | |
| chr2:238,425,866–238,427,628 | 118 bp | At TSS Multiome | 920 |
Genomic view of the ASB1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.