ADCY3
adenylate cyclase 3 | AC3

This gene encodes adenylyl cyclase 3 which is a membrane-associated enzyme and catalyzes the formation of the secondary messenger cyclic adenosine monophosphate (cAMP). This protein appears to be widely expressed in various human tissues and may be involved in a number of physiological and pathophysiological metabolic processes. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2016]

Member of: DE-6
Biological processes 51 terms
Golgi apparatus (GO:0005794)Golgi apparatus (GO:0005794)acrosome reaction (GO:0007340)acrosome reaction (GO:0007340)adenylate cyclase activity (GO:0004016)adenylate cyclase activity (GO:0004016)adenylate cyclase activity (GO:0004016)adenylate cyclase activity (GO:0004016)adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189)adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189)adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189)adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189)cAMP biosynthetic process (GO:0006171)cAMP biosynthetic process (GO:0006171)cAMP biosynthetic process (GO:0006171)cellular response to forskolin (GO:1904322)cellular response to forskolin (GO:1904322)cellular response to glucagon stimulus (GO:0071377)cellular response to oxygen-containing compound (GO:1901701)ciliary membrane (GO:0060170)ciliary membrane (GO:0060170)cilium (GO:0005929)cilium (GO:0005929)cyclic nucleotide biosynthetic process (GO:0009190)cytoplasm (GO:0005737)cytoplasm (GO:0005737)cytoplasmic side of plasma membrane (GO:0009898)flagellated sperm motility (GO:0030317)flagellated sperm motility (GO:0030317)intracellular signal transduction (GO:0035556)membrane (GO:0016020)membrane (GO:0016020)membrane (GO:0016020)negative regulation of appetite (GO:0032099)non-motile cilium membrane (GO:0098804)non-motile cilium membrane (GO:0098804)olfactory learning (GO:0008355)olfactory learning (GO:0008355)phosphorus-oxygen lyase activity (GO:0016849)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)renal water homeostasis (GO:0003091)sensory perception of smell (GO:0007608)single fertilization (GO:0007338)single fertilization (GO:0007338)system process (GO:0003008)vascular endothelial cell response to laminar fluid shear stress (GO:0097700)vascular endothelial cell response to laminar fluid shear stress (GO:0097700)
Expression (TPM)
ADCY3 — as a Regulated Gene

TFs regulating ADCY3 0 TFs

Transcription factors with Perturb-seq knockdown data for ADCY3. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ADCY3 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ADCY3

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ADCY3, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr2:24,792,642–24,794,076 126.9 kb Distal (>10kb) Multiome 1010
chr2:24,821,671–24,822,465 98.0 kb Distal (>10kb) Multiome 172
chr2:24,827,474–24,828,282 92.4 kb Distal (>10kb) Multiome 460
chr2:24,919,504–24,920,824 28 bp At TSS Multiome 431
chr2:24,971,247–24,972,384 51.7 kb Distal (>10kb) Multiome 1032
chr2:25,041,314–25,043,455 121.8 kb Distal (>10kb) Multiome 743
chr2:25,131,383–25,132,709 212.1 kb Distal (>10kb) Multiome 162
chr2:25,161,156–25,161,629 241.2 kb Distal (>10kb) Multiome 112
chr2:25,168,208–25,168,958 248.4 kb Distal (>10kb) Multiome 225
chr2:25,215,506–25,216,577 295.9 kb Distal (>10kb) Multiome 303

Genome Browser

Genomic view of the ADCY3 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr2:24,782,642 – 25,226,577
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq